ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n6kB1 - ECOD Domain | ECOD

ECOD/Domains/e6n6kB1

e6n6kB1

UID: 002500880

PDB

Range: B:2-187
PDB: 6N6K chain B(all domains)
UniProt: Q9Y3B8 (all domains)
Gene: REXO2

Molecule: RNA exonuclease 2 homolog,Small fragment nuclease

3D Structure

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Related Domains

Browse other domains in RNase_T →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_T(2484.1.1.13)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00929RNase_T

Exonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 6N6K RCSB PDB: 6N6K PDBe: 6N6K UniProt: Q9Y3B8

Downloads

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