ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6r53A1 - ECOD Domain | ECOD

ECOD/Domains/e6r53A1

e6r53A1

UID: 002501053

PDB

Range: A:26-220
PDB: 6R53 chain A(all domains)
UniProt: Q183R7 (all domains)
Gene: zmp1

Molecule: Pro-Pro endopeptidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in ATLF →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyATLF(2498.1.1.34)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Anthrax toxin lethal factor, N- and C-terminal domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6R53 RCSB PDB: 6R53 PDBe: 6R53 UniProt: Q183R7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure