ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gn5A1 - ECOD Domain | ECOD

ECOD/Domains/e6gn5A1

e6gn5A1

UID: 002502967

RepresentativePDB

Range: A:323-499
PDB: 6GN5 chain A(all domains)
UniProt: Q8IYS0 (all domains)
Gene: GRAMD1C

Molecule: GRAM domain-containing protein 1C

3D Structure

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Related Domains

Browse other domains in VASt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyVASt(331.3.1.17)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

VAD1 Analog of StAR-related lipid transfer domain

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6GN5 RCSB PDB: 6GN5 PDBe: 6GN5 UniProt: Q8IYS0

Downloads

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