ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rtdB2 - ECOD Domain | ECOD

ECOD/Domains/e6rtdB2

e6rtdB2

UID: 002503466

PDB

Range: B:3-80
PDB: 6RTD chain B(all domains)
UniProt: Q9I609 (all domains)
Gene: nirN

Molecule: Cytochrome c

3D Structure

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Related Domains

Browse other domains in Cytochrome_CBB3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrome_CBB3(107.1.1.9)

Ligands

in contact, ≤ 4 Å

Heme DDHE
drugDrugBank DB03469
Ferroheme CHEC
drugDrugBank DB03317

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13442Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 6RTD RCSB PDB: 6RTD PDBe: 6RTD UniProt: Q9I609

Downloads

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