ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gt9B2 - ECOD Domain | ECOD

ECOD/Domains/e6gt9B2

e6gt9B2

UID: 002508405

PDB

Range: B:44-152,B:287-326
PDB: 6GT9 chain B(all domains)
UniProt: W8QN64 (all domains)
Gene: ganP

Molecule: Putative sugar binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Ligands

in contact, ≤ 4 Å

beta-D-galactopyranoseGAL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 6GT9 RCSB PDB: 6GT9 PDBe: 6GT9 UniProt: W8QN64

Downloads

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