ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i4fA2 - ECOD Domain | ECOD

ECOD/Domains/e6i4fA2

e6i4fA2

UID: 002508480

PDB

Range: A:6-137
PDB: 6I4F chain A(all domains)
UniProt: Q8I4X0 (all domains)
Gene: ACT1

Molecule: Actin-1

3D Structure

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Related Domains

Browse other domains in Actin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyActin(2484.1.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ATPATP
drugDrugBank DB00171
Magnesium ion

Pfam Families

Actin

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 6I4F RCSB PDB: 6I4F PDBe: 6I4F UniProt: Q8I4X0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Calcium ionCA

metalwithin 5 Å only

+ 1 additive (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer. Drug annotations from DrugDomain.