ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6j26B2 - ECOD Domain | ECOD

ECOD/Domains/e6j26B2

e6j26B2

UID: 002508505

PDB

Range: B:91-351
PDB: 6J26 chain B(all domains)
UniProt: Q5JIZ3 (all domains)
Gene: bpsA

Molecule: N(4)-bis(aminopropyl)spermidine synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in BpsA_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyBpsA_C(2003.1.5.18)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
N~1~,N~1~,N~1~-tris(3-azaniumylpropyl)butane-1,4-diaminiumB5L
FE (III) IONFE

Pfam Families

Branched-chain polyamine synthase A C-terminal domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6J26 RCSB PDB: 6J26 PDBe: 6J26 UniProt: Q5JIZ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.