ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gaxB8 - ECOD Domain | ECOD

ECOD/Domains/e1gaxB8

e1gaxB8

UID: 002510700

PDB

Range: B:1-165,B:453-520
PDB: 1GAX chain B(all domains)
UniProt: P96142 (all domains)
Gene: valS

Molecule: VALYL-TRNA SYNTHETASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1+tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1+tRNA-synt_1g(2005.1.1.40)

Ligands

in contact, ≤ 4 Å

N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONEVAA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 1GAX RCSB PDB: 1GAX PDBe: 1GAX UniProt: P96142

Downloads

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