ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ivsB8 - ECOD Domain | ECOD

ECOD/Domains/e1ivsB8

e1ivsB8

UID: 002510757

PDB

Range: B:1-165,B:453-520
PDB: 1IVS chain B(all domains)
UniProt: P96142 (all domains)
Gene: valS

Molecule: Valyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1+tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1+tRNA-synt_1g(2005.1.1.40)

Ligands

in contact, ≤ 4 Å

N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONEVAA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

ECOD PDB View: 1IVS RCSB PDB: 1IVS PDBe: 1IVS UniProt: P96142

Downloads

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