ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gv2B1 - ECOD Domain | ECOD

ECOD/Domains/e6gv2B1

e6gv2B1

UID: 002511492

PDB

Range: B:2-294
PDB: 6GV2 chain B(all domains)
UniProt: O54288 (all domains)

Molecule: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

3-deoxy-D-arabino-hexonic acidSSH
drugDrugBank DB03303
L-glyceraldehydeGXV

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

Glycerin

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6GV2 RCSB PDB: 6GV2 PDBe: 6GV2 UniProt: O54288

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.