ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e8nB1 - ECOD Domain | ECOD

ECOD/Domains/e6e8nB1

e6e8nB1

UID: 002512674

RepresentativePDB

Range: B:37-222
PDB: 6E8N chain B(all domains)
UniProt: Q9UM22 (all domains)
Gene: EPDR1

Molecule: Mammalian ependymin-related protein 1

3D Structure

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Related Domains

Browse other domains in Ependymin →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipoprotein localization factors LolAB(71)

HH-groupLipoprotein localization factors LolAB(71.1)

TT-groupLipoprotein localization factors LolAB(71.1.1)

FFamilyEpendymin(71.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00811Ependymin

Ependymin

ClanCL0048LolA_LolB

External Links

ECOD PDB View: 6E8N RCSB PDB: 6E8N PDBe: 6E8N UniProt: Q9UM22

Downloads

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