ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6jimA3 - ECOD Domain | ECOD

ECOD/Domains/e6jimA3

e6jimA3

UID: 002514720

PDB

Range: A:336-463
PDB: 6JIM chain A(all domains)
UniProt: A0A076V769 (all domains)

Molecule: helicase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_C9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyPeptidase_C9(2004.1.1.69)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Aluminum ionAL
metal
Chloride ion

Pfam Families

PF01707Peptidase_C9

Peptidase family C9

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6JIM RCSB PDB: 6JIM PDBe: 6JIM UniProt: A0A076V769

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Fluoride ionF

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.