ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6itgB1 - ECOD Domain | ECOD

ECOD/Domains/e6itgB1

e6itgB1

UID: 002514781

PDB

Range: B:19-517
PDB: 6ITG chain B(all domains)
UniProt: A0A2S7V3I3 (all domains)

Molecule: Alginate lyase

3D Structure

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Related Domains

Browse other domains in Chondroitinas_B →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyChondroitinas_B(207.2.1.24)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Malonate Ion)

GlycerinGOL
DrugBank DB09462
Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14592Chondroitinas_B

Chondroitinase B

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 6ITG RCSB PDB: 6ITG PDBe: 6ITG UniProt: A0A2S7V3I3

Downloads

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