ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6dzxC2 - ECOD Domain | ECOD

ECOD/Domains/e6dzxC2

e6dzxC2

UID: 002514894

PDB

Range: C:43-123,C:237-283
PDB: 6DZX chain C(all domains)
UniProt: C6S9R8 (all domains)
Gene: sfbA

Molecule: Lipoprotein

3D Structure

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Related Domains

Browse other domains in Lipoprotein_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLipoprotein_9(7523.1.1.13)

Ligands

in contact, ≤ 4 Å

D-MethionineMED
drugDrugBank DB02893

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03180Lipoprotein_9

NlpA lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 6DZX RCSB PDB: 6DZX PDBe: 6DZX UniProt: C6S9R8

Downloads

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