ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e1xB1 - ECOD Domain | ECOD

ECOD/Domains/e6e1xB1

e6e1xB1

UID: 002514906

PDB

Range: B:2-170
PDB: 6E1X chain B(all domains)
UniProt: Q9KL03 (all domains)
Gene: speG

Molecule: Spermidine N(1)-acetyltransferase

3D Structure

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Related Domains

Browse other domains in Acetyltransf_3 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyAcetyltransf_3(213.1.1.25)

Ligands

in contact, ≤ 4 Å

SpermineSPM
drugDrugBank DB00127
N-[3-({4-[(3-aminopropyl)amino]butyl}amino)propyl]acetamideSP5

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Tromethamine)

(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF13302Acetyltransf_3

Acetyltransferase (GNAT) domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 6E1X RCSB PDB: 6E1X PDBe: 6E1X UniProt: Q9KL03

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

TromethamineTRS

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.