ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6jl9A1 - ECOD Domain | ECOD

ECOD/Domains/e6jl9A1

e6jl9A1

UID: 002514980

RepresentativePDB

Range: A:30-218
PDB: 6JL9 chain A(all domains)
UniProt: F6VRB7 (all domains)
Gene: epdr1

Molecule: Ependymin-related 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ependymin →

Classification

AArchitecturebeta meanders(a.2)

XX-groupLipoprotein localization factors LolAB(71)

HH-groupLipoprotein localization factors LolAB(71.1)

TT-groupLipoprotein localization factors LolAB(71.1.1)

FFamilyEpendymin(71.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00811Ependymin

Ependymin

ClanCL0048LolA_LolB

External Links

ECOD PDB View: 6JL9 RCSB PDB: 6JL9 PDBe: 6JL9 UniProt: F6VRB7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure