ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qttA1 - ECOD Domain | ECOD

ECOD/Domains/e6qttA1

e6qttA1

UID: 002515265

PDB

Range: A:347-675
PDB: 6QTT chain A(all domains)
UniProt: P43254 (all domains)
Gene: COP1

Molecule: E3 ubiquitin-protein ligase COP1

3D Structure

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Related Domains

Browse other domains in WD40, Beta-prop_NOL10_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, Beta-prop_NOL10_N(5.1.4.254)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Malonate Ion)

GlycerinGOL
DrugBank DB09462
Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF23098Beta-prop_NOL10_N

Nucleolar protein 10-like, N-terminal domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6QTT RCSB PDB: 6QTT PDBe: 6QTT UniProt: P43254

Downloads

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