ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rarI2 - ECOD Domain | ECOD

ECOD/Domains/e6rarI2

e6rarI2

UID: 002515281

PDB

Range: I:345-436
PDB: 6RAR chain I(all domains)
UniProt: A0A0A2ACP7 (all domains)
Gene: EU96_0746

Molecule: ATP-dependent DNA ligase

3D Structure

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Related Domains

Browse other domains in DNA_ligase_OB_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_OB_2(2.1.1.65)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14743DNA_ligase_OB_2

DNA ligase OB-like domain

ClanCL0021OB

External Links

ECOD PDB View: 6RAR RCSB PDB: 6RAR PDBe: 6RAR UniProt: A0A0A2ACP7

Downloads

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