ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rauI1 - ECOD Domain | ECOD

ECOD/Domains/e6rauI1

e6rauI1

UID: 002516133

PDB

Range: I:146-344
PDB: 6RAU chain I(all domains)
UniProt: A0A0A2ACP7 (all domains)
Gene: EU96_0746

Molecule: ATP-dependent DNA ligase

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_M →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyDNA_ligase_A_M(206.1.3.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF01068DNA_ligase_A_M

ATP dependent DNA ligase domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 6RAU RCSB PDB: 6RAU PDBe: 6RAU UniProt: A0A0A2ACP7

Downloads

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Drug annotations from DrugDomain.