ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e0wB1 - ECOD Domain | ECOD

ECOD/Domains/e6e0wB1

e6e0wB1

UID: 002516186

PDB

Range: B:201-670
PDB: 6E0W chain B(all domains)
UniProt: I7I026 (all domains)
Gene: PHI92_gene_150

Molecule: Bacteriophage Phi92 gp150

3D Structure

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Related Domains

Browse other domains in WcaM →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyWcaM(207.2.1.66)

Ligands

in contact, ≤ 4 Å

4,6-O-(1-Carboxyethylidene)-Beta-D-GlucoseHLA
drugDrugBank DB04386within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Pfam Families

Colanic acid biosynthesis WcaM

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 6E0W RCSB PDB: 6E0W PDBe: 6E0W UniProt: I7I026

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Sulfate ion, 1,2-ETHANEDIOL, Tetraethylene glycol)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.