ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ix5A1 - ECOD Domain | ECOD

ECOD/Domains/e6ix5A1

e6ix5A1

UID: 002516246

PDB

Range: A:-1-129
PDB: 6IX5 chain A(all domains)
UniProt: B8NJH3 (all domains)
Gene: lepI

Molecule: O-methyltransferase lepI

3D Structure

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Related Domains

Browse other domains in Dimerisation →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDimerisation(101.1.2.88)

Ligands

in contact, ≤ 4 Å

4-hydroxy-3-[(2S,6E,8E)-2-methyldeca-6,8-dienoyl]-5-phenylpyridin-2(1H)-oneB0L

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOL

Pfam Families

PF08100Dimerisation

O-methyltransferase dimerisation domain

ClanCL0123HTH

External Links

ECOD PDB View: 6IX5 RCSB PDB: 6IX5 PDBe: 6IX5 UniProt: B8NJH3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.