ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n0yF1 - ECOD Domain | ECOD

ECOD/Domains/e6n0yF1

e6n0yF1

UID: 002516405

PDB

Range: F:169-324
PDB: 6N0Y chain F(all domains)
UniProt: E8N6F3 (all domains)
Gene: mvaD

Molecule: Diphosphomevalonate decarboxylase

3D Structure

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Related Domains

Browse other domains in MDD_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGHMP Kinase, C-terminal domain(304.1)

TT-groupGHMP Kinase, C-terminal domain(304.1.1)

FFamilyMDD_C(304.1.1.3)

Ligands

in contact, ≤ 4 Å

(3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACIDDP6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Mevalonate 5-diphosphate decarboxylase C-terminal domain

ClanCL0677GHMP_C

External Links

ECOD PDB View: 6N0Y RCSB PDB: 6N0Y PDBe: 6N0Y UniProt: E8N6F3

Downloads

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