ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6os5A1 - ECOD Domain | ECOD

ECOD/Domains/e6os5A1

e6os5A1

UID: 002516491

PDB

Range: A:6-358
PDB: 6OS5 chain A(all domains)
UniProt: A8M6W6 (all domains)
Gene: cymD

Molecule: CymD prenyltransferase

3D Structure

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Related Domains

Browse other domains in Trp_DMAT →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyTrp_DMAT(4194.1.1.2)

Ligands

in contact, ≤ 4 Å

Benzoic acidBEZ
drugDrugBank DB03793
TryptophanTRP
drugDrugBank DB00150

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11991Trp_DMAT

Tryptophan dimethylallyltransferase

External Links

ECOD PDB View: 6OS5 RCSB PDB: 6OS5 PDBe: 6OS5 UniProt: A8M6W6

Downloads

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