ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qplB1 - ECOD Domain | ECOD

ECOD/Domains/e6qplB1

e6qplB1

UID: 002516519

PDB

Range: B:195-269
PDB: 6QPL chain B(all domains)
UniProt: Q9Y657 (all domains)
Gene: SPIN1

Molecule: Spindlin-1

3D Structure

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Related Domains

Browse other domains in Spin-Ssty →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySpin-Ssty(4.1.1.31)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol, Phosphate ion)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Phosphate ion

Pfam Families

PF02513Spin-Ssty

Spin/Ssty Family

ClanCL0010SH3

External Links

ECOD PDB View: 6QPL RCSB PDB: 6QPL PDBe: 6QPL UniProt: Q9Y657

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.