ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qplB2 - ECOD Domain | ECOD

ECOD/Domains/e6qplB2

e6qplB2

UID: 002516520

PDB

Range: B:119-194
PDB: 6QPL chain B(all domains)
UniProt: Q9Y657 (all domains)
Gene: SPIN1

Molecule: Spindlin-1

3D Structure

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Related Domains

Browse other domains in Spin-Ssty →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySpin-Ssty(4.1.1.31)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
[3-(aminomethyl)-5-[3-(1,3-dihydroisoindol-2-yl)propoxy]-4-methoxy-phenyl]methanamineJC5

+ 2 additives (Dimethyl sulfoxide, (4S)-2-METHYL-2,4-PENTANEDIOL)

Pfam Families

PF02513Spin-Ssty

Spin/Ssty Family

ClanCL0010SH3

External Links

ECOD PDB View: 6QPL RCSB PDB: 6QPL PDBe: 6QPL UniProt: Q9Y657

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxide

DrugBank DB01093

(4S)-2-METHYL-2,4-PENTANEDIOLMPD

Shown in the structure viewer. Drug annotations from DrugDomain.