ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6qrxA1 - ECOD Domain | ECOD

ECOD/Domains/e6qrxA1

e6qrxA1

UID: 002516528

PDB

Range: A:2-388
PDB: 6QRX chain A(all domains)
UniProt: P24300 (all domains)
Gene: xylA

Molecule: Xylose isomerase

3D Structure

Loading viewer...

Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
MANGANESE (II) IONMN
metal
Sodium ionNA

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6QRX RCSB PDB: 6QRX PDBe: 6QRX UniProt: P24300

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Isopropyl alcohol, 1,2-ETHANEDIOL)

Isopropyl alcoholIPA
DrugBank DB02325
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.