ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ow3D10 - ECOD Domain | ECOD

ECOD/Domains/e6ow3D10

e6ow3D10

UID: 002520933

PDB

Range: D:778-948
PDB: 6OW3 chain D(all domains)
UniProt: Q8RQE8 (all domains)
Gene: rpoC

Molecule: DNA-directed RNA polymerase subunit beta'

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959)

HH-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959.1)

TT-groupfirst helical domain in RNA-polymerase beta-prime subunit(4959.1.1)

FFamilyRNA_pol_Rpb1_3(4959.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
PYROPHOSPHATE 2-POP
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04983RNA_pol_Rpb1_3

RNA polymerase Rpb1, domain 3

External Links

ECOD PDB View: 6OW3 RCSB PDB: 6OW3 PDBe: 6OW3 UniProt: Q8RQE8

Downloads

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