ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p3hB1 - ECOD Domain | ECOD

ECOD/Domains/e6p3hB1

e6p3hB1

UID: 002520960

PDB

Range: B:8-174
PDB: 6P3H chain B(all domains)
UniProt: Q0KJL4 (all domains)
Gene: ligU

Molecule: (4E)-oxalomesaconate Delta-isomerase

3D Structure

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Related Domains

Browse other domains in PrpF →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPrpF(286.1.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(1E)-4-oxobut-1-ene-1,2,4-tricarboxylic acidNQM

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PrpF protein

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 6P3H RCSB PDB: 6P3H PDBe: 6P3H UniProt: Q0KJL4

Downloads

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