ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ot1P3 - ECOD Domain | ECOD

ECOD/Domains/e6ot1P3

e6ot1P3

UID: 002521398

PDB

Range: P:31-119,P:203-255,P:474-505
PDB: 6OT1 chain P(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: BG505 gp120

3D Structure

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Related Domains

Browse other domains in GP120 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupgp120 inner domain(1061)

HH-groupgp120 inner domain(1061.1)

TT-groupgp120 inner domain(1061.1.1)

FFamilyGP120(1061.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope glycoprotein GP120

External Links

ECOD PDB View: 6OT1 RCSB PDB: 6OT1 PDBe: 6OT1 UniProt: Q2N0S6

Downloads

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