ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nyaA3 - ECOD Domain | ECOD

ECOD/Domains/e6nyaA3

e6nyaA3

UID: 002522000

PDB

Range: A:406-593,A:863-913
PDB: 6NYA chain A(all domains)
UniProt: P22515 (all domains)
Gene: UBA1

Molecule: Ubiquitin-activating enzyme E1 1

3D Structure

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Related Domains

Browse other domains in ThiF →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupActivating enzymes of the ubiquitin-like proteins(2003.1.9)

FFamilyThiF(2003.1.9.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

Pfam Families

ThiF family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6NYA RCSB PDB: 6NYA PDBe: 6NYA UniProt: P22515

Downloads

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1,2-ETHANEDIOL

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.