ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6op8A1 - ECOD Domain | ECOD

ECOD/Domains/e6op8A1

e6op8A1

UID: 002522022

PDB

Range: A:3-170
PDB: 6OP8 chain A(all domains)
UniProt: O00102 (all domains)
Gene: ubc7

Molecule: Ubiquitin-conjugating enzyme E2-18 kDa

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 6OP8 RCSB PDB: 6OP8 PDBe: 6OP8 UniProt: O00102

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.