ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h5uB1 - ECOD Domain | ECOD

ECOD/Domains/e6h5uB1

e6h5uB1

UID: 002522882

PDB

Range: B:212-302
PDB: 6H5U chain B(all domains)
UniProt: V6F235 (all domains)
Gene: mamM

Molecule: Magnetosome protein MamM, Cation efflux protein family

3D Structure

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Related Domains

Browse other domains in ZT_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupCation efflux protein cytoplasmic domain-like(327.7)

TT-groupCation efflux protein cytoplasmic domain-like(327.7.1)

FFamilyZT_dimer(327.7.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF16916ZT_dimer

Cation efflux protein, cytoplasmic domain

ClanCL0232NifU

External Links

ECOD PDB View: 6H5U RCSB PDB: 6H5U PDBe: 6H5U UniProt: V6F235

Downloads

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Drug annotations from DrugDomain.