ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mlgE2 - ECOD Domain | ECOD

ECOD/Domains/e6mlgE2

e6mlgE2

UID: 002522967

PDB

Range: E:1-90,E:191-238
PDB: 6MLG chain E(all domains)
UniProt: P02911 (all domains)
Gene: argT

Molecule: Lysine/arginine/ornithine-binding periplasmic protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Sodium ionNA
metal

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 6MLG RCSB PDB: 6MLG PDBe: 6MLG UniProt: P02911

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.