ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nydC1 - ECOD Domain | ECOD

ECOD/Domains/e6nydC1

e6nydC1

UID: 002523081

PDB

Range: C:3-178
PDB: 6NYD chain C(all domains)
UniProt: P14682 (all domains)
Gene: CDC34

Molecule: Ubiquitin-conjugating enzyme E2-34 kDa

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 6NYD RCSB PDB: 6NYD PDBe: 6NYD UniProt: P14682

Downloads

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