ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6h5oA3 - ECOD Domain | ECOD

ECOD/Domains/e6h5oA3

e6h5oA3

UID: 002523920

PDB

Range: A:399-417,A:457-524
PDB: 6H5O chain A(all domains)
UniProt: A0A0H3JPA5 (all domains)
Gene: mecA

Molecule: Penicillin binding protein 2 prime

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Ligands

in contact, ≤ 4 Å

Piperacillin (Open Form)JPP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6H5O RCSB PDB: 6H5O PDBe: 6H5O UniProt: A0A0H3JPA5

Downloads

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