ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oj1A1 - ECOD Domain | ECOD

ECOD/Domains/e6oj1A1

e6oj1A1

UID: 002524029

PDB

Range: A:68-318
PDB: 6OJ1 chain A(all domains)
UniProt: Q4WX16 (all domains)
Gene: AFUA_3G07890

Molecule: Endo alpha-1,4 polygalactosaminidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_114 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_114(2002.1.1.112)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Potassium ionK
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF03537Glyco_hydro_114

Glycoside-hydrolase family GH114

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6OJ1 RCSB PDB: 6OJ1 PDBe: 6OJ1 UniProt: Q4WX16

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.