ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p3oA1 - ECOD Domain | ECOD

ECOD/Domains/e6p3oA1

e6p3oA1

UID: 002524038

PDB

Range: A:10-358
PDB: 6P3O chain A(all domains)

Molecule: Tetrahydroprotoberberine N-methyltransferase

3D Structure

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Related Domains

Browse other domains in CMAS, Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCMAS, Methyltransf_25(2003.1.5.152)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
(5S,12bS)-5-methyl-6,7,12b,13-tetrahydro-2H,4H,10H-[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquinolino[3,2-a]isoquinolin-5-iumSYT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Mycolic acid cyclopropane synthetase

ClanCL0063NADP_Rossmann

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6P3O RCSB PDB: 6P3O PDBe: 6P3O

Downloads

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