ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6itoB1 - ECOD Domain | ECOD

ECOD/Domains/e6itoB1

e6itoB1

UID: 002524920

PDB

Range: B:2-70,B:167-344
PDB: 6ITO chain B(all domains)
UniProt: P9WKE5 (all domains)
Gene: pyk

Molecule: Pyruvate kinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Ribose-5-phosphateR5P
drugDrugBank DB02053
Magnesium ionMG
metal

+ 1 additive (Oxalate ion)

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6ITO RCSB PDB: 6ITO PDBe: 6ITO UniProt: P9WKE5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.