ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6op2B1 - ECOD Domain | ECOD

ECOD/Domains/e6op2B1

e6op2B1

UID: 002525111

PDB

Range: B:350-523
PDB: 6OP2 chain B(all domains)
UniProt: P07329 (all domains)
Gene: nifK

Molecule: Nitrogenase molybdenum-iron protein beta chain

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

+ 1 additive (Imidazole)

Imidazole

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 6OP2 RCSB PDB: 6OP2 PDBe: 6OP2 UniProt: P07329

Downloads

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DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.