ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rbfB1 - ECOD Domain | ECOD

ECOD/Domains/e6rbfB1

e6rbfB1

UID: 002525209

RepresentativePDB

Range: B:856-1034
PDB: 6RBF chain B(all domains)
UniProt: Q02817 (all domains)
Gene: MUC2

Molecule: Mucin-2

3D Structure

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Related Domains

Browse other domains in VWD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRepulsive guidance molecule (RGM) family(6129)

HH-groupRepulsive guidance molecule (RGM) family(6129.1)

TT-groupRepulsive guidance molecule (RGM) family(6129.1.1)

FFamilyVWD(6129.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

von Willebrand factor type D domain

ClanCL0741RGM

External Links

ECOD PDB View: 6RBF RCSB PDB: 6RBF PDBe: 6RBF UniProt: Q02817

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.