ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1j09A2 - ECOD Domain | ECOD

ECOD/Domains/e1j09A2

e1j09A2

UID: 002526280

RepresentativePDB

Range: A:1-101,A:185-236
PDB: 1J09 chain A(all domains)
UniProt: P27000 (all domains)
Gene: gltX

Molecule: Glutamyl-tRNA synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA-synt_1c →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1c(2005.1.1.5)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Glutamic acidGLU
drugDrugBank DB00142
Magnesium ion

Pfam Families

PF00749tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

ClanCL0039HUP

External Links

ECOD PDB View: 1J09 RCSB PDB: 1J09 PDBe: 1J09 UniProt: P27000

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.