ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6co7A3 - ECOD Domain | ECOD

ECOD/Domains/e6co7A3

e6co7A3

UID: 002526312

RepresentativePDB

Range: A:812-1136
PDB: 6CO7 chain A(all domains)
UniProt: A7T1N0 (all domains)
Gene: TRPM2

Molecule: Predicted protein

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
Calcium ionCA
metal
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6CO7 RCSB PDB: 6CO7 PDBe: 6CO7 UniProt: A7T1N0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.