ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hafA3 - ECOD Domain | ECOD

ECOD/Domains/e6hafA3

e6hafA3

UID: 002526422

PDB

Range: A:366-593
PDB: 6HAF chain A(all domains)
UniProt: P37063 (all domains)
Gene: pox5

Molecule: Pyruvate oxidase

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_C(7574.1.1.5)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Potassium ionK
metal
Magnesium ion

Pfam Families

PF02775TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 6HAF RCSB PDB: 6HAF PDBe: 6HAF UniProt: P37063

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Thiamine diphosphateTPP

within 5 Å only

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.