ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qp8A3 - ECOD Domain | ECOD

ECOD/Domains/e6qp8A3

e6qp8A3

UID: 002526635

PDB

Range: A:40-531
PDB: 6QP8 chain A(all domains)
UniProt: A0A0B4KG38 (all domains)
Gene: Sema2b

Molecule: IP13724p

3D Structure

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Related Domains

Browse other domains in Sema →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilySema(5.1.4.12)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

Sema domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6QP8 RCSB PDB: 6QP8 PDBe: 6QP8 UniProt: A0A0B4KG38

Downloads

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Drug annotations from DrugDomain.