ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6kjlA2 - ECOD Domain | ECOD

ECOD/Domains/e6kjlA2

e6kjlA2

UID: 002526784

PDB

Range: A:0-206
PDB: 6KJL chain A(all domains)
UniProt: Q9RC94 (all domains)
Gene: xynJ

Molecule: Endo-1,4-beta-xylanase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_11 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_11(10.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer.

Pfam Families

PF00457Glyco_hydro_11

Glycosyl hydrolases family 11

ClanCL0004Concanavalin

External Links

ECOD PDB View: 6KJL RCSB PDB: 6KJL PDBe: 6KJL UniProt: Q9RC94

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.