ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6se8A5 - ECOD Domain | ECOD

ECOD/Domains/e6se8A5

e6se8A5

UID: 002527258

PDB

Range: A:10-225
PDB: 6SE8 chain A(all domains)
UniProt: A0A023UGN9 (all domains)

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyGlyco_hydro_2_N(10.32.1.9)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (HEPES, Acetate ion)

HEPESEPE
DrugBank DB16872
Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02837Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 6SE8 RCSB PDB: 6SE8 PDBe: 6SE8 UniProt: A0A023UGN9

Downloads

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