ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jytA6 - ECOD Domain | ECOD

ECOD/Domains/e6jytA6

e6jytA6

UID: 002527345

PDB

Range: A:-1-46
PDB: 6JYT chain A(all domains)
UniProt: P0C6X7 (all domains)
Gene: rep

Molecule: Helicase

3D Structure

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Related Domains

Browse other domains in CoV_NSP13_ZBD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyCoV_NSP13_ZBD(376.1.1.36)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20632CoV_NSP13_ZBD

Coronavirus Non-structural protein 13, zinc-binding domain

External Links

ECOD PDB View: 6JYT RCSB PDB: 6JYT PDBe: 6JYT UniProt: P0C6X7

Downloads

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