ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6paiD1 - ECOD Domain | ECOD

ECOD/Domains/e6paiD1

e6paiD1

UID: 002527540

PDB

Range: D:248-327
PDB: 6PAI chain D(all domains)
UniProt: Q14498 (all domains)
Gene: RBM39

Molecule: RNA-binding protein 39

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Ligands

in contact, ≤ 4 Å

E-7820O6M
drugDrugBank DB12505

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 6PAI RCSB PDB: 6PAI PDBe: 6PAI UniProt: Q14498

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure