ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pxuB2 - ECOD Domain | ECOD

ECOD/Domains/e6pxuB2

e6pxuB2

UID: 002527951

PDB

Range: B:441-581
PDB: 6PXU chain B(all domains)
UniProt: Q8IXK2 (all domains)
Gene: GALNT12

Molecule: Polypeptide N-acetylgalactosaminyltransferase 12

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

alpha-N-Acetyl-D-galactosamineA2G
drugDrugBank DB03567

+ 2 additives (1,2-ETHANEDIOL, Glycerol)

1,2-ETHANEDIOLEDO
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 6PXU RCSB PDB: 6PXU PDBe: 6PXU UniProt: Q8IXK2

Downloads

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