ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1fv1E2 - ECOD Domain | ECOD

ECOD/Domains/e1fv1E2

e1fv1E2

UID: 002528488

PDB

Range: E:1-87
PDB: 1FV1 chain E(all domains)
UniProt: Q30154 (all domains)
Gene: HLA-DRB5

Molecule: MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN

3D Structure

Loading viewer...

Related Domains

Browse other domains in MHC_II_beta →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_II_beta(233.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00969MHC_II_beta

Class II histocompatibility antigen, beta domain

ClanCL0343MHC

External Links

ECOD PDB View: 1FV1 RCSB PDB: 1FV1 PDBe: 1FV1 UniProt: Q30154

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure